Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923313.1_cds_XP_016471950.1_64234
CDS Infomation

[gene=LOC107794015] [db_xref=GeneID:107794015] [protein=nephrocystin-3-like] [protein_id=XP_016471950.1] [location=join(6302..6975,8619..9527,10434..10668)] [gbkey=CDS]
Sequence

ATGCCGGGAATAGTTTCAGTCAAAACGCCACCGGAGGCTCAGCCGTTGAGAATATCAGTT
CCGGATGAGTCCAACGGGCGGGTCGGAGCAAGTTCGGAGAGATCCGAACCCGTTAACCCG
AAGAGTAACTCTCCTGCGCCGCGAAGACCTCCTTCACCGTCGCCTTCAACTTCACGCGCC
AAGCCGTCACCAGATCGGAGCTCAGGAAAGAAGAAATCGCCACCAGAGAAGATTGTCATC
GACGAGTCGTCTCTTGACAATCCCGATCTAGGACCGTTCCTGTTGAAGTTAGCGCGTGAC
ACGATTGCCTCCGGCGAGGGACCGAACAAGGCGCTAGATTACGCTCTACGCGCTGCGAAG
TCGTTTGAGAAATGCGCGATTGACGGCGAGCCGAGTTTGGATCTGGCGATGAGCCTCCAC
GTCGTGGCGGCTATATACTGTAGTCTCGGGAGGTTCGAGGAGGCGATTCCGGTGCTAGAA
AGGGCGATTAAAGTGCCAGAAGTCTCAAAAGGTGCAGATCACGCGCTCGCGGCGTTCTCA
GGGTATATGCAGCTCGGTGATACTCATTCTATGCTTGGACAGTTAGATCGGTCGATTGAA
TGTTACAAAGATGGTTTGAAAATACAGATGGAAGCTTTAGGAGATACAGATCCGAGAGTG
GCTGAGACTTGCAGGTACTTGGCCGAAGCCCATGTTCAGGCAATGCAATTTGATGAAGCC
GAGAATTTGTGCAAGAAAACACTGGAAATCCATCGTGTACACAGCCCACCTGCTTCTCTT
GAAGAGGCAGCTGATCGTCGTTTAATGGCTCTCATATGTGAGGCTAAAGGCGATTATGAG
TCAGCCCTTGAACACCTTGTACTTGCAAGCATGGCTATGATCGCCAATGGACAGGAAAAC
GAGGTTGCAGCTATTGATGTTAGTATTGGGAACATCTACTTGTCTCTGTCTCGCTTTGAT
GAGGCTGTCTTCTCCTATCAGAAGGCACTTACTGTTTTCAAATCATCTAAGGGAGACAAC
CATCCTTCAGTTGCATCTGTCTTTGTAAGGCTGGCTGACCTATATTATAAGACAGGAAAA
CTGAGGGAATCCAGATCCTATTGTGAAAATGCTCTAAGAATATATGCAAAACCTGTGCCT
GGAACAACTGCAGAAGAGATTGCTTGTGGATTGACGGAAATTTCAGCTATTTATGAGTTA
TTTAATGAACCTGAGGAGGCACTGAAACTCCTTCTGAAGGCAATGAAACTTTTGGAGGAT
AAACCAGGGCAGCAAAGTACGATTGCTGGCATTGAAGCACGGATGGGTGTTATGTTCTAT
ATGGTGGGAAGATATGAAGAGGCACACAGTTCCTTTGAAAATGCTGTAGCAAAACTTAGA
GCTGGGGGTGAGAGGAAGTCAGCCTTCTTTGGGGTTGTTTTGAATCAGATGGGATTGTCT
TCTGTTCAATTGTTCAAAATAGACGAGGCTGCTGAATTATTTGAAGAAGCAAGACAAATT
CTGGAACAGGAGTGTGGTCCTTGTCATCAAGATACTCTTGGTGTGTACAGCAATCTTGCA
GCAACTTATGATGCATTGGGAAGAGTTGATGATGCCATTGAGATTTTGGAGTATGTTCTT
AAATTGAGAGAAGAGAAACTTGGAACTGCAAATCCTGATTTTGATGATGAGAAGAAAAGG
CTGGCCGAATTATTGAAAGAAGCAGGCAAATCTCGCAACAAAAATGCGAAGTCCTTGGAG
AACCTTATCGATCCCAATTCTAAAAGAACAAAGAAGGAGCCGTCGAGGAAGTGGTCTGCC
TTTGGGTTTAGGAGTTGA

Peptide Sequence

PEP ID

XP_016471950.1
PEP Infomation

PREDICTED: nephrocystin-3-like [Nicotiana tabacum]
Sequence

MPGIVSVKTPPEAQPLRISVPDESNGRVGASSERSEPVNPKSNSPAPRRPPSPSPSTSRA
KPSPDRSSGKKKSPPEKIVIDESSLDNPDLGPFLLKLARDTIASGEGPNKALDYALRAAK
SFEKCAIDGEPSLDLAMSLHVVAAIYCSLGRFEEAIPVLERAIKVPEVSKGADHALAAFS
GYMQLGDTHSMLGQLDRSIECYKDGLKIQMEALGDTDPRVAETCRYLAEAHVQAMQFDEA
ENLCKKTLEIHRVHSPPASLEEAADRRLMALICEAKGDYESALEHLVLASMAMIANGQEN
EVAAIDVSIGNIYLSLSRFDEAVFSYQKALTVFKSSKGDNHPSVASVFVRLADLYYKTGK
LRESRSYCENALRIYAKPVPGTTAEEIACGLTEISAIYELFNEPEEALKLLLKAMKLLED
KPGQQSTIAGIEARMGVMFYMVGRYEEAHSSFENAVAKLRAGGERKSAFFGVVLNQMGLS
SVQLFKIDEAAELFEEARQILEQECGPCHQDTLGVYSNLAATYDALGRVDDAIEILEYVL
KLREEKLGTANPDFDDEKKRLAELLKEAGKSRNKNAKSLENLIDPNSKRTKKEPSRKWSA
FGFRS

Transcript Sequence

Gene sequence data has not been registered.